64
Participants
Start Date
February 9, 2021
Primary Completion Date
February 9, 2026
Study Completion Date
February 9, 2026
Bioinformatics analysis of single cell transcriptomics data
"1. Sample collection: Myeloid cell purification + Single cell sequencing~2. Primary analysis: QC sequencing data + Reads alignment + UMI quantification~3. Bioinformatics analysis: Quality Control (Number of genes, UMI content,%mitochondrial genes, % riboprotein genes,Filtering low quality cells) + Normalization and scaling (Normalization, Remove unwanted sources of variation, HVG detection) + PCA Clustering Markers (PCA and PC selection, Clustering, t-SNE, Differential expression for markers identification)~4. Validation: FACS analysis + immunohistochemistry"
NOT_YET_RECRUITING
ASST Monza-C. CHIRURGIA GENERALE E D'URGENZA I, Monza
RECRUITING
ASST Monza-Ospedale San Gerardo, S.C. Chirurgia Toracica, Monza
University of Milano Bicocca
OTHER